How Foods Shape Your Gut Microbes and Help Keep Your Intestines Healthy
by Anna Sandhu | May 09, 2025
Reviewed by Dr. Arun, M.Pharm., PGDRA, Ph.D.
Our gut is home to trillions of tiny living organisms, often called the gut microbiome. These microbes play a big role in how our gut works, and the food we eat has a strong influence on them. The article reviews how different foods and nutrition impact the gut microbiome and how this affects intestinal (gut) health.
Why the gut microbiome matters
Inside our intestines, microbes break down foods we cannot digest ourselves. They also help maintain the barrier of the gut wall and influence our immune system. A healthy microbiome has many types of microbes working together. If the balance is off, the gut wall may become weaker or inflamed.
How diet affects the gut microbes
What we eat—such as fibres, proteins, fats, and processed foods—affects which microbes grow in the gut and how active they are. For example, a diet rich in fibre helps many beneficial microbes, while a diet that is heavy in processed foods and low in fibre may reduce microbial diversity and upset gut balance.
What this means for intestinal health
When gut microbes are balanced and active, they help keep the intestinal lining strong and the immune system calm. But when the diet causes an imbalance, it may lead to problems: the gut wall may become leaky, inflammation can rise, and gut conditions like inflammatory bowel disease (IBD) may become worse.
Key take-away points
- Eating a variety of whole foods, plenty of fibre from plants, and fewer ultra-processed foods supports a healthy gut microbiome.
- Poor diets can impact the number and diversity of microbes, which may weaken gut health.
- The microbe-food-gut interaction means that diet and gut health are tightly linked.
- This knowledge can help create nutritional strategies to keep the gut healthy, especially for people with gut conditions.
Final thought
Think of your intestines like a thriving city of microbes. The food you provide is like the supplies delivered to that city. If the supplies are varied, nutritious, and plentiful, the city runs smoothly. If the supplies are poor or one-sided, some districts suffer, and the walls protecting the city get weak. By choosing good foods, you’re helping build a healthy, strong “microbe city” in your gut—and protecting your gut lining in the process.
More Information: Influence of Foods and Nutrition on the Gut Microbiome and Implications for Intestinal Health. DOI: 10.3390/ijms23179588